Home > Community > Removing stop codons from alignment file for dn/ds calculation
Upvote

25

Downvote
+ Bioinformatics
+ Phylogenetics
Posted by
Mohammed Sahal

Removing stop codons from alignment file for dn/ds calculation

Captain's Italian Food  Follow

I would align your sequences with the software available here: https://github.com/veg/hyphy-analyses/tree/master/codon-msa

More

Upvote

VOTE

Downvote
Ernest Carrott Junior  Follow
thank you i will try this out as wellMore
Upvote

VOTE

Downvote
Elena Elena  Follow
post-msa.bf is it like shell script? im seeing this extension for the first timeMore
Upvote

VOTE

Downvote
Dukula Jayasinghe  Follow
That is a good approach and very up to date answer.More
Upvote

VOTE

Downvote