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Home > Encyclopedia > 5-Methyl-2′-deoxycytidine

5-Methyl-2′-deoxycytidine

pharmaceutical raw materials
5-Methyl-2′-deoxycytidine structure

5-Methyl-2′-deoxycytidine 

structure
  • CAS No:

    838-07-3

  • Formula:

    C10H15N3O4

  • Chemical Name:

    5-Methyl-2′-deoxycytidine

  • Synonyms:

    Cytidine,2′-deoxy-5-methyl-;2′-Deoxy-5-methylcytidine;5-Methyl-2′-deoxycytidine;5-Methyldeoxycytidine;2′-Deoxy-5′-methylcytidine;1867-19-2

  • Categories:

    Biochemical Engineering  >  Nucleoside Drugs

Description

5-Methyl-2'-deoxycytidine in single-stranded DNA can act in cis to signal de novo DNA methylation[1][2].


5-methyl-2'-deoxycytidine is a 2'-deoxycytidine.

5-Methyl-2′-deoxycytidine Basic Attributes

241.24

241.24

212-655-1

29389090

Characteristics

108

-1.4

White to Off-white Powder

1.6±0.1 g/cm3

217-219 °C(lit.)

492.8°C at 760 mmHg

251.9±31.5 °C

1.694

soluble in water.

−20°C

Safety Information

3

36/37/38

26-36-24/25

HA3860000

Xi

P261, P264, P271, P280, P302+P352, P304+P340, P305+P351+P338, P312, P321, P332+P313, P337+P313, P362, P403+P233, P405, P501

H315

|Warning|H315 (100%): Causes skin irritation [Warning Skin corrosion/irritation]|P261, P264, P271, P280, P302+P352, P304+P340, P305+P351+P338, P312, P321, P332+P313, P337+P313, P362, P403+P233, P405, and P501|Aggregated GHS information provided by 4 companies from 2 notifications to the ECHA C&L Inventory. Each notification may be associated with multiple companies.

Drug Information

5-methyl-2'-deoxycytidine

5-Methyl-2′-deoxycytidine Use and Manufacturing

Methods of Manufacturing

General procedure: To a solution of the nucleosides (2–20) in DMF ([substrate]=0.3M, except for 3 and 4, [3, 4]=0.05M) were added PyAOP (1.6 eq) and DBU (1.6 eq). The reaction was stirred at 20°C for 1min. To the reaction solution was added N-nucleophiles (4 eq) (or 1a in THF, conc. NHGeneral procedure: To a solution of the nucleosides (2–20) in DMF ([substrate]=0.3M, except for 3 and 4, [3, 4]=0.05M) were added PyAOP (1.6 eq) and DBU (1.6 eq). The reaction was stirred at 20°C for 1min. To the reaction solution was added N-nucleophiles (4 eq) (or 1a in THF, conc. NH

Uses

5-Methyl-2'-deoxycytidine is a pyrimidine nucleoside that when incorporated into single-stranded DNA can act in cis to signal de novo DNA methylation. It has been used in epigenetics research to investigate the dynamics of DNA methylation pattern in the control of gene expression.

Computed Properties

Molecular Weight:241.24
XLogP3:-1.4
Hydrogen Bond Donor Count:3
Hydrogen Bond Acceptor Count:4
Rotatable Bond Count:2
Exact Mass:241.10625597
Monoisotopic Mass:241.10625597
Topological Polar Surface Area:108
Heavy Atom Count:17
Complexity:393
Defined Atom Stereocenter Count:3
Covalently-Bonded Unit Count:1
Compound Is Canonicalized:Yes

Drug Function and Efficacy

It can improve blood circulation disorders, reduce vascular resistance, increase myocardial oxygen utilization, promote the enhancement of hematopoietic system activity, increase the number of white blood cells, and increase vascular elasticity and prevent vascular sclerosis.

This ingredient has been used in drugs with the following functions (note: it does not mean that the ingredient itself has the following health functions)

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